The Use of Electrophoretic Isozymes to Detect Tungro Infected Rice
Abstract
Tungro is one of the most common diseases of rice plants which caused by double infection of RTBV (Rice Tungro Bacilliform Virus) and RTSV (Rice Tungro Spherical Virus), and it gives a significant economic loss. These viruses are transmitted by green leaf hopper (Nephottetix virescens. Distant), and the interaction between host plant and the viruses were still quite difficult to be fully understood. In order to look at whether there are any differences between the healthy and tungro infected rice, this study was set to examine the character differences between the infected and the healthy plants based on isozyme banding pattern. The infected plants were collected from three districts around Surakarta (Sragen, Sukoharjo, Klaten) followed by Polyacrilamide Gel Electrophoresis (PAGE) to evaluate the isozyme banding patterns. There were peroxidase, esterase and acid phosphotase isozymes used. The results showed that the real differences of isozyme banding patterns of both healthy and tungro infected plants were discovered. In all cases, the Tungro infected rice had thicker and more band numbers compared to the healthy one. This evident suggested that Tungro infected rice could be detected early using PAGE method.
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Adam, C., & Jolly, J. J. (1980). Electrophoretic buffer system and stain recipes. Sydney, AU: Division Forest Research, Commonwealth Scientific and Industrial Research Organisation.
Cahyarini, R. D., Yunus, A., & Purwanto, E. (2004). Identifikasi keragaman genetik beberapa varietas lokal kedelai di Jawa berdasarkan analisis isozim [Identification of genetic diversity based on isozyme analyse on several local soybean from Java]. Agrosains, 6(2), 96-104. Retrieved from https://scholar.google.co.id/citations?view_op=view_citation&hl=id&user=Hur5HnMAAAAJ&citation_for_view=Hur5HnMAAAAJ:u-x6o8ySG0sC website
Dahal, G., Hibino, H., & Aguiero, V. M. (1997). Population characteristics and tungro transmission by Nephotettix virescens (Hemiptera: Cicadellidae) on selected resistant rice cultivars. Bulletin of Entomological Research, 87, 387–395. Retrieved from http://cabweb.org/PDF/BER/BER87-4/544.PDF PDF
Degani, C., & El-batsri, R. (1990). Enzyme polymorphism in mango. Journal of the American Society for Horticulturae Science, 115(5), 844–847. Retrieved from http://journal.ashspublications.org/content/115/5/844.abstract website
Degani, C., Beiles, A., El-Batsri, R., Goren, M., & Gazit, S. (1995). Identifying lychee cultivars by isozyme analysis. Journal of the American Society for Horticultural Science, 120(2), 307-312. Retrieved from http://journal.ashspublications.org/content/120/2/307.full.pdf PDF
Hibino, H., Saleh, N., & Roechan, M. (1979). Transmission of two kinds of rice tungro-associated viruses by insect vectors. Phytopathology, 69(12), 1266-1268. Retrieved from http://www.apsnet.org/publications/phytopathology/backissues/Documents/1979Articles/Phyto69n12_1266.pdf PDF
Johnson, M., Janakiraman, N., & Irudayaraj, V. (2012). Isozyme analysis on different varieties of sugarcane. Journal of Stress Physiology & Biochemistry, 8(2), 23-31. Retrieved from http://cyberleninka.ru/article/n/isozyme-analysis-on-different-varieties-of-sugarcane website
Medhabati, K., Nongalleima, Kh., Rajiv, D. K., & Sunitibala, H. (2013). Establishing genetic diversity among indigenous cultivated and wild rice species of Manipur using isozyme analysis. Advances in Applied Science Research, 4(2), 309-314. Retrieved from http://www.imedpub.com/articles/establishing-genetic-diversity-among-indigenous-cultivated-and-wild-ricespecies-of-manipur-using-isozyme-analysis.pdf PDF
Mills, A. K., & Crowden, R. K. (1968). Distribution of soluble proteins and enzymes during early development of Pisum sativum. Australian Journal of Biological Sciences, 21, 1131-1141. Retrieved from http://www.publish.csiro.au/bi/pdf/BI9681131 PDF
Nurmiyati, Sugiyarto, & Sajidan. (2009). Kimpul (Xanthosoma spp.) characterization based on morphological characteristic and isozymic analysis. Nusantara Bioscience, 1(3), 138–145. crossref
Patra, N., & Chawla, H. S. (2010). Biochemical and RAPD molecular markers for establishing distinctiveness of basmati rice (Oryza sativa L.) varieties as additional descriptors for plant variety protection. Indian Journal of Biotechnology, 9(4), 371-377. Retrieved from http://nopr.niscair.res.in/bitstream/123456789/10434/1/IJBT%209%284%29%20371-377.pdf PDF
PPDOL Surakarta. (2013). Laporan tahunan sebaran hama dan penyakit padi di wilayah Solo Raya [The annual report on distribution of rice pests in the area of Surakarta]. Solo, ID: Plant Pest and Diseases Observation Laboratory of Surakarta.
Pushpa, C., Gowda, R., Nethra, N., Nataraj, K., Rani, K. U., & Gangaraju, N. (2014). Identification of parental lines and rice hybrid (KRH-4) using protein and isozyme electrophoresis. American International Journal of Research in Science, Technology, Engineering & Mathematics, 5(1), 01-04. Retrieved from http://iasir.net/AIJRSTEMpapers/AIJRSTEM14-105.pdf PDF
Rothe, G. M. (1994). Electrophoresis of enzymes: Laboratory methods. Berlin, DE: Springer-Verlag.
Sama, S., Hasanuddin, A., Manwan, I., Cabunagan, R. C., & Hibino, H. (1991). Integrated management of rice tungro disease in South Sulawesi, Indonesia. Crop Protection, 10(1), 34–40. crossref
Siva, R., Kumar, K., & Rajasekaran, C. (2013). Genetic diversity study of important Indian rice genotypes using biochemical and molecular markers. African Journal of Biotechnology, 12(10), 1004-1009. http://doi.org/10.5897/AJB10.797
Sulistyarsi, A., Suranto, & Supriyadi. (2012). The total protein band profile of the green leafhoppers (Nephotettix virescens) and the leaves of rice (Oryza sativa) infected by tungro virus. Nusantara Bioscience, 4(1), 32–35. crossref
rajatani.my.id. (2020). rajatani.my.id -. [online] Available at: http://www.rajatani.my.id/ [Accessed 12 Jan. 2020].
Suranto. (2002). Cluster analysis of Ranunculus species. Biodiversitas, 3(1), 201-206. Retrieved from http://biodiversitas.mipa.uns.ac.id/D/D0301/D030106.pdf PDF
van Regenmortel, M. H., Fauquet, C. M., Bishop, D. H. L., Carstens, E. B., Estes, M. K., Lemon, S. M., … Wickner, R. B. (2000). Virus taxonomy: Classification and nomenclature of viruses. Seventh report of the International Committee on Taxonomy of Viruses. San Diego, USA: Academic Press.
Widiyanti, Suranto, & Sugiyarto. (2008). Studi variasi morfologi biji, serbuk sari dan pola pita isozim padi (Oryza sativa) varietas rojolele [Studies on the variation of seed and pollen morphology and isozymic pattern of rice (Oryza sativa) of rojolele cultivar]. Bioteknologi, 5(1), 18-25. crossref
DOI: http://doi.org/10.17503/agrivita.v39i2.643
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